PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g794670.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 239aa MW: 27801.3 Da PI: 7.8265

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g794670.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.1	6.2e-16	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ll ++++ +G g W+ ++++ g++R++k+c+++w++yl Pd.00g794670.m01 10 KGAWTREEDDLLRQCIENHGEGKWHQVPNKAGLNRCRKSCRLWWLNYL 57 79********************************************97 PP
2	Myb_DNA-binding	51.1	3.1e-16	63	106	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T++E +l+++++k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g794670.m01 63 RGEFTEDEVDLIIRLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNT 106 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MEGSNLGVRK GAWTREEDDL LRQCIENHGE GKWHQVPNKA GLNRCRKSCR LWWLNYLKPN 60 IKRGEFTEDE VDLIIRLHKL LGNRWSLIAG RLPGRTANDV KNYWNTRLRM DSRLKKVKDK 120 PQETIKAIVI RPQPRSFIKS SNCLSSKEPI LDHIQTVENF STPSQSSPST KNGKDWWETF 180 LDDEDVFEKA TCYGLALEEE EFTSFWVDNM PQSKRQCTNV TEEGLGTGDL SFNVDFWNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	5e-63	MYB family protein