PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g796470.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 403aa    MW: 45646.3 Da    PI: 6.9836
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g796470.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS58.51.4e-1844107164
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal 64 
                       l++lL++cA++v+sg+ e+a+  L ++s+laspdgd+mqR+aayf eALa r+++ ++++++  
  Pd.00g796470.m01  44 LIQLLYSCANHVASGSIENANIWLDHISQLASPDGDTMQRIAAYFNEALADRMLKAWPGCVRGY 107
                       689*******************************************************998765 PP
2GRAS275.51.7e-84117398134374
              GRAS 134 sRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrll............ 214
                        R++gpp+lRiTg+++    +ke l ++ +rL++ A +l++pf+fn+ ++++le+l++e+Lrvk+gEalaV++vlqlh+ll            
  Pd.00g796470.m01 117 RRKDGPPHLRITGIHE----QKEVLDQMFHRLTEEAGNLNIPFQFNP-IVSKLENLDIESLRVKTGEALAVCSVLQLHSLLaaeddlrrkspl 204
                       5889************....9**************************.7999***************************************** PP

              GRAS 215 ........................................desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
                                                                 s +      ++L  +++lsPk++v++eqe++hn++++++r++eal++y al
  Pd.00g796470.m01 205 psknlqkvlhmnkltlgewlekdpisaynlspdsalcplsGGSPK----MGSFLTSLWGLSPKLMVITEQESNHNGHTLMDRIMEALNFYGAL 293
                       ********************************9887743333333....567***************************************** PP

              GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
                       fd+le+++pr   er+kvE++l+g+ei+n++aceg+er+erhe+lekW  rle aGF+ vpls++ + qa++ l+ ++  g++++ee+g+lv+
  Pd.00g796470.m01 294 FDCLESTVPRSPLERQKVEKMLFGEEIKNIIACEGTERTERHEKLEKWILRLELAGFGRVPLSYHGMLQARRQLQGYE--GFKIKEENGCLVI 384
                       *****************************************************************************9..************* PP

              GRAS 361 gWkdrpLvsvSaWr 374
                       +W+drpL+s+SaWr
  Pd.00g796470.m01 385 CWHDRPLFSISAWR 398
                       *************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MAQEDGSPVT SSPLQFFPWL SPGMGSPYPT WLRELKSEER GLYLIQLLYS CANHVASGSI  60
ENANIWLDHI SQLASPDGDT MQRIAAYFNE ALADRMLKAW PGCVRGYKSG HSGSNGRRKD  120
GPPHLRITGI HEQKEVLDQM FHRLTEEAGN LNIPFQFNPI VSKLENLDIE SLRVKTGEAL  180
AVCSVLQLHS LLAAEDDLRR KSPLPSKNLQ KVLHMNKLTL GEWLEKDPIS AYNLSPDSAL  240
CPLSGGSPKM GSFLTSLWGL SPKLMVITEQ ESNHNGHTLM DRIMEALNFY GALFDCLEST  300
VPRSPLERQK VEKMLFGEEI KNIIACEGTE RTERHEKLEK WILRLELAGF GRVPLSYHGM  360
LQARRQLQGY EGFKIKEENG CLVICWHDRP LFSISAWRFR RYE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-143GRAS family protein