PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g797390.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YA

Protein Properties

Length: 414aa MW: 45630.7 Da PI: 7.1136

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g797390.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	103	2.8e-32	172	228	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak e ekkl +k+rkpylheSRh hAlrR+Rg+gGrF Pd.00g797390.m01 172 EEPVYVNAKQYHGILRRRQSRAKTELEKKL-IKARKPYLHESRHLHALRRARGCGGRF 228 69**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MMPAKSKDED PHIEHGAQTV LESAIYAQPW WRGVGNNSSS GESAPASSLV DHRDSMVMNG 60 AMQSQANARL DGGANFNKEL RTTVGSQSDQ KNGCKNQQIK SVSSSVVPTM GEHLDPNSQM 120 ELVGHSIVLT SYPYSDPQYG RMLTPYGAQA MLPPHFYGSH HGRMPLPLEM EEEPVYVNAK 180 QYHGILRRRQ SRAKTELEKK LIKARKPYLH ESRHLHALRR ARGCGGRFLN TKKQDDNDEN 240 SSVEKGMHLD ANDSAQSAKS SFECFPNTSN GTFDSSNVQQ EGSDPWFRAH KNHTLSGDNG 300 NGHGPSSAYP STFGDSKESV FLGQQRENMQ LNGLSRGAIP SEAEGMCSLS WGETLLCDVY 360 IRQIILGFGY FCNYWGVVEG DRCEVHVVFS QPSLALTCVV ETVKKASVGN SSRN

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MMPAKSKDED PHIEHGAQTV LESAIYAQPW WRGVGNNSSS GESAPASSLV DHRDSMVMNG  60
AMQSQANARL DGGANFNKEL RTTVGSQSDQ KNGCKNQQIK SVSSSVVPTM GEHLDPNSQM  120
ELVGHSIVLT SYPYSDPQYG RMLTPYGAQA MLPPHFYGSH HGRMPLPLEM EEEPVYVNAK  180
QYHGILRRRQ SRAKTELEKK LIKARKPYLH ESRHLHALRR ARGCGGRFLN TKKQDDNDEN  240
SSVEKGMHLD ANDSAQSAKS SFECFPNTSN GTFDSSNVQQ EGSDPWFRAH KNHTLSGDNG  300
NGHGPSSAYP STFGDSKESV FLGQQRENMQ LNGLSRGAIP SEAEGMCSLS WGETLLCDVY  360
IRQIILGFGY FCNYWGVVEG DRCEVHVVFS QPSLALTCVV ETVKKASVGN SSRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30500.1	9e-38	NF-YA family protein