PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g798560.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRAS

Protein Properties

Length: 1304aa MW: 142812 Da PI: 6.2293

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g798560.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	344.7	1.6e-105	902	1261	2	363
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 ++Ll+cA+ ++++d +a + L rl+e +s +gdp++R+ +yfteAL++r+++ + k+l++++t ++ ++ + ++k++++++P+ k Pd.00g798560.m01 902 LKALLDCAR-LAESDPDRAVKSLIRLRESVSDRGDPTERVGFYFTEALQSRVSS--LQSEKSLAATTTYDTACEDFTLSYKALNDACPYSK 989 689****.566699999*******************************..6666778888888888*************** PP GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180 f+hltaNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R+ g+p ++Ri g+ +p+ g +++l +tg+rL++fA+ l+++fef++ Pd.00g798560.m01 990 FAHLTANQAILEATERATKIHIVDFGIVQGVQWAALLQALATRSTGKPsRIRISGIPAPSLGtsPATSLFATGNRLRDFAKLLELNFEFEP 1080 ****************************************666659*****9999999********************* PP GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271 + + +++le + +rv+p+EalaVnl+lql++lldes + + + Lkl ksl+Pk+v++ e ea++++ F rf +al+yy+alf+sl Pd.00g798560.m01 1081 -ILTPVHELEESCFRVEPDEALAVNLMLQLYNLLDESPTAVQ---SALKLAKSLNPKIVTLGEYEANLSRVGFTSRFKNALKYYTALFESL 1167 .799***************************9999999...9***************************************** PP GRAS 272 eaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvl 360 e ++ r+s er kvE+ llgr+i vv e+ +rer e +e+W+ +e++GF+pv+ls++a++qak ll ++++ y++ e+ gs+ Pd.00g798560.m01 1168 EPNMLRDSPERLKVEKLLLGRRIGGVVGPEQPGtKRERFEDKEQWKYLMESSGFEPVALSHYAVSQAKILLWNYNNSLYSLIESpPGSFNT 1258 *************************998769**************************************9989977662666669 PP GRAS 361 gWk 363 gWk Pd.00g798560.m01 1259 GWK 1261 997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1304 aa Download sequence
MWRCVSRRLG VPYSQRSVSS DSLRSHFSRL FSTESATGRS SYTVVDHTYD AVVVGAGGAG 60 LRAAIGLSEH GFNTACITKL FPTRSHTVAA QGGINAALGN MTEDDWRWHM YDTVKGSDWL 120 GDQDAIQYMC REAPKAVIEL ENYGLPFSRT EDGRIYQRAF GGQSLDFGKG GQAYRCACAA 180 DRTGHALLHT LYGQAMKHNT QFFVEYFALD LLMNSDGSCQ GVIALNMEDG TLHRFQAAST 240 ILATGGYGRA YFSATSAHTC TGDGNAMVAR AGLPLQDLEF VQFHPTGIYG AGCLITEGSR 300 GEGGILRNSE GERFMERYAP TAKDLASRDV VSRSMTMEIR EGRGVGPLKD HIYLHLNHLP 360 PDVLKERLPG ISETAAIFAG VDVTKEPIPV LPTVHYNMGG IPTNYHGEVV TKKGDDPDVI 420 IPGLMAAGEA ACASVHGANR LGANSLLDIV VFGRACANRV AEIHKPGEKQ QPLEKDSGEQ 480 TIAWLDKIRN SNGSLPTSQI RLNMQRIMQN NAAVFRTQET LEEGSQLIDK AWESFDNVQV 540 KDRSLIWNSD LIETIELENL LINACVTMHS AEARKESRGA HAREDFTKRD DEKWMKHTLG 600 YWENEKVRLD YRPVHLNTLD DEIESFPPKA RPLSPNSSIA AASSSAATSK SFAPLPPPHN 660 SRQKSLLPAF ESAEVRSLAE SLARDIVRGN PDVKWESIKG LENAKRLLKE AVVMPIKYPK 720 YFTGLLSPWK GILLFGPPGT GKLSGSSDAG GEPGFPFPNL DHHPTGFRFS DLGGGGAAEF 780 DSDEWMDSII GGGDSTDSSN LPSACDTWHG SNADFGLYCA DPFQPPCSSR LSNPCSPPSD 840 LNRVIFSETQ NQLPAWTAPP PPPPAPHVVV KQAKSADPPP QPNDAVGVSS RSPEIESAPP 900 LLKALLDCAR LAESDPDRAV KSLIRLRESV SDRGDPTERV GFYFTEALQS RVSSLQSEKS 960 LAATTTYDTA CEDFTLSYKA LNDACPYSKF AHLTANQAIL EATERATKIH IVDFGIVQGV 1020 QWAALLQALA TRSTGKPSRI RISGIPAPSL GTSPATSLFA TGNRLRDFAK LLELNFEFEP 1080 ILTPVHELEE SCFRVEPDEA LAVNLMLQLY NLLDESPTAV QSALKLAKSL NPKIVTLGEY 1140 EANLSRVGFT SRFKNALKYY TALFESLEPN MLRDSPERLK VEKLLLGRRI GGVVGPEQPG 1200 TKRERFEDKE QWKYLMESSG FEPVALSHYA VSQAKILLWN YNNSLYSLIE SPPGSFNTGW 1260 KPISFSTPLT VVLVQCFFFF MIRNGTQDCP SELTVVSLKT VIRV

Sequence ? help Back to Top

Protein Sequence Length: 1304 aa Download sequence

MWRCVSRRLG VPYSQRSVSS DSLRSHFSRL FSTESATGRS SYTVVDHTYD AVVVGAGGAG  60
LRAAIGLSEH GFNTACITKL FPTRSHTVAA QGGINAALGN MTEDDWRWHM YDTVKGSDWL  120
GDQDAIQYMC REAPKAVIEL ENYGLPFSRT EDGRIYQRAF GGQSLDFGKG GQAYRCACAA  180
DRTGHALLHT LYGQAMKHNT QFFVEYFALD LLMNSDGSCQ GVIALNMEDG TLHRFQAAST  240
ILATGGYGRA YFSATSAHTC TGDGNAMVAR AGLPLQDLEF VQFHPTGIYG AGCLITEGSR  300
GEGGILRNSE GERFMERYAP TAKDLASRDV VSRSMTMEIR EGRGVGPLKD HIYLHLNHLP  360
PDVLKERLPG ISETAAIFAG VDVTKEPIPV LPTVHYNMGG IPTNYHGEVV TKKGDDPDVI  420
IPGLMAAGEA ACASVHGANR LGANSLLDIV VFGRACANRV AEIHKPGEKQ QPLEKDSGEQ  480
TIAWLDKIRN SNGSLPTSQI RLNMQRIMQN NAAVFRTQET LEEGSQLIDK AWESFDNVQV  540
KDRSLIWNSD LIETIELENL LINACVTMHS AEARKESRGA HAREDFTKRD DEKWMKHTLG  600
YWENEKVRLD YRPVHLNTLD DEIESFPPKA RPLSPNSSIA AASSSAATSK SFAPLPPPHN  660
SRQKSLLPAF ESAEVRSLAE SLARDIVRGN PDVKWESIKG LENAKRLLKE AVVMPIKYPK  720
YFTGLLSPWK GILLFGPPGT GKLSGSSDAG GEPGFPFPNL DHHPTGFRFS DLGGGGAAEF  780
DSDEWMDSII GGGDSTDSSN LPSACDTWHG SNADFGLYCA DPFQPPCSSR LSNPCSPPSD  840
LNRVIFSETQ NQLPAWTAPP PPPPAPHVVV KQAKSADPPP QPNDAVGVSS RSPEIESAPP  900
LLKALLDCAR LAESDPDRAV KSLIRLRESV SDRGDPTERV GFYFTEALQS RVSSLQSEKS  960
LAATTTYDTA CEDFTLSYKA LNDACPYSKF AHLTANQAIL EATERATKIH IVDFGIVQGV  1020
QWAALLQALA TRSTGKPSRI RISGIPAPSL GTSPATSLFA TGNRLRDFAK LLELNFEFEP  1080
ILTPVHELEE SCFRVEPDEA LAVNLMLQLY NLLDESPTAV QSALKLAKSL NPKIVTLGEY  1140
EANLSRVGFT SRFKNALKYY TALFESLEPN MLRDSPERLK VEKLLLGRRI GGVVGPEQPG  1200
TKRERFEDKE QWKYLMESSG FEPVALSHYA VSQAKILLWN YNNSLYSLIE SPPGSFNTGW  1260
KPISFSTPLT VVLVQCFFFF MIRNGTQDCP SELTVVSLKT VIRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66770.1	1e-171	GRAS family protein