PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g798750.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ZF-HD

Protein Properties

Length: 241aa MW: 27254.3 Da PI: 10.0624

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g798750.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	41.3	3.7e-13	2	30	30	59
ZF-HD_dimer 30 psegeegtaaalkCaACgCHRnFHRrevee 59 ps gee ++alkCaAC+CHRnFHR+e e Pd.00g798750.m01 2 PS-GEEDIPEALKCAACECHRNFHRKEIEG 30 55.666789*****************9875 PP
2	Homeobox	14.7	5.3e-05	122	182	1	57
TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r Rt+f++eq e + e+ e k + +++e ++L +++g++ ++ kvW +N ++ +kk Pd.00g798750.m01 122 KRFRTKFSQEQKEKMMEVAEklgwKIQRHDEQEVQKLCSEVGIKRQVFKVWMHNNKQAMKK 182 789***********99996766688899*************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MPSGEEDIPE ALKCAACECH RNFHRKEIEG DHLPNNYYVV NHQKHTISRR DSETRVLQLP 60 PPPPPPVHHS AAGGPVPPMM MAFGGGGGGG GGADESSSED LNMNNLFRAT YAAGQQAAGS 120 KKRFRTKFSQ EQKEKMMEVA EKLGWKIQRH DEQEVQKLCS EVGIKRQVFK VWMHNNKQAM 180 KKKQINKLSR SLILSFWRCV FINIVWVITV TSAIYFQTKA SSPIIYTYSK SPADNLRRKI 240 M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18350.1	9e-39	ZF-HD family protein