PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g800650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

YABBY

Protein Properties

Length: 185aa MW: 21094.7 Da PI: 5.6383

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g800650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	152.2	4.6e-47	3	135	34	169
YABBY 34 vvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekr 122 vtvrCGhC+ llsvn++kas +lla+ + de+ +e lee ++++ + +++ s+s vs+ +++e+ ++ p v++PPekr Pd.00g800650.m01 3 AVTVRCGHCSCLLSVNMMKASfvplHLLASLTQ-DEQREELCLEEVDKQNN--NPLDMR--SPSMVVSN--SDNEEEGTISMNPIVNKPPEKR 88 69**************999666666666665.44444444444443333..333333..33333333..13445555666666**** PP YABBY 123 qrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 qr+Psayn fikeei+r+ka+nP+++h+eafs+aaknWa fP+i ++ Pd.00g800650.m01 89 QRAPSAYNHFIKEEIRRLKAENPSMTHKEAFSTAAKNWAQFPPIQYK 135 *****************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MLAVTVRCGH CSCLLSVNMM KASFVPLHLL ASLTQDEQRE ELCLEEVDKQ NNNPLDMRSP 60 SMVVSNSDNE EEGTISMNPI VNKPPEKRQR APSAYNHFIK EEIRRLKAEN PSMTHKEAFS 120 TAAKNWAQFP PIQYKGDGPD GESCTNQREE NVTWDSDVPE AHEDGKIFRE RKAPRHSIWA 180 RTPFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	4e-58	YABBY family protein