PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g804670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 270aa    MW: 31020 Da    PI: 6.8268
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g804670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix76.25.2e-2438120186
          trihelix   1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +W  +e+++Li++r e+e r ++ +k+ k+lWe+vs+km+ergf+r+p+qCk+kw+nl  ryk  ++++ +    s ++cp+f++l+
  Pd.00g804670.m01  38 QWAPEETRELIAIRGELEIRNSNlAKRSKALWEAVSSKMAERGFNRTPEQCKCKWKNLLIRYKGKETSDPE----SGRECPFFEELQ 120
                       7*****************9988768999************************************9999997....4667******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MYEAGGDEEE GMGMGMGSGG TGMMKKMMTS PAGGGSGQWA PEETRELIAI RGELEIRNSN  60
LAKRSKALWE AVSSKMAERG FNRTPEQCKC KWKNLLIRYK GKETSDPESG RECPFFEELQ  120
AVFTERANNM QRLLLESETG SARSKKMGKR KLRPGRSSDE FSEDPDEEDE DDKKRKGERV  180
IMPKATNAAS GTSSSIQDML KAFFQQQQRM EMEWREMMER RAQERRMFEQ EWRQKMEKVE  240
RESSESSVYA AADAPLQRIK EMNGMKFNYF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145152KKMGKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.13e-28Trihelix family protein