PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g804770.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 395aa MW: 42902 Da PI: 9.8675

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g804770.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	93.6	3.3e-29	244	381	6	128
NAM 6 rFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgy 82 +F+P+d el+ e+L++k+ + + ++e+i+++d iy+ +P +Lp k++ ++ +fF+k+ ++yatg+rk+r+ +++ + Pd.00g804770.m01 244 HFDPSDAELL-EHLAAKCGVGNrkphMFIDEFIPTLDgdngIYYDHPANLP-GSKNDGSSFHFFHKTINAYATGHRKRRKvdyhrslaAEHVR 334 6*******.899999766554565444456777766677******.556778899***************8788888887799 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+k++++ +g ++g+kk++v+y +++ +k++k++Wvmh+y+l Pd.00g804770.m01 335 WHKTGKTKPIME-NGVQKGCKKIMVLYksSKKGSKANKSNWVMHQYHL 381 **********.999*******4434677888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MSFASFSGNN STGSCLNFST MAQNPAIFQS LPDMAQQGYK VGLASQAVQK KNHQISERKT 60 GGGSNNADDG LKAASGKSSS SIGQRQTLVF DNSARTLNFM SSPVTGSWPP RSIALTTTAT 120 NAPVDSKTSS NSQQQHMFQF QLQKPHMLQQ QQPAIAAKFP KNSACFVSNA VADSATALND 180 SLSGKLPAEI GNLSNLQIFN IASNHLSDEI SGELPPRLKY LNLSSNSFSG EIPKSIVNLT 240 GLQHFDPSDA ELLEHLAAKC GVGNRKPHMF IDEFIPTLDG DNGIYYDHPA NLPGSKNDGS 300 SFHFFHKTIN AYATGHRKRR KVDYHRSLAA EHVRWHKTGK TKPIMENGVQ KGCKKIMVLY 360 KSSKKGSKAN KSNWVMHQYH LGTEDGEKEG ESGSA

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MSFASFSGNN STGSCLNFST MAQNPAIFQS LPDMAQQGYK VGLASQAVQK KNHQISERKT  60
GGGSNNADDG LKAASGKSSS SIGQRQTLVF DNSARTLNFM SSPVTGSWPP RSIALTTTAT  120
NAPVDSKTSS NSQQQHMFQF QLQKPHMLQQ QQPAIAAKFP KNSACFVSNA VADSATALND  180
SLSGKLPAEI GNLSNLQIFN IASNHLSDEI SGELPPRLKY LNLSSNSFSG EIPKSIVNLT  240
GLQHFDPSDA ELLEHLAAKC GVGNRKPHMF IDEFIPTLDG DNGIYYDHPA NLPGSKNDGS  300
SFHFFHKTIN AYATGHRKRR KVDYHRSLAA EHVRWHKTGK TKPIMENGVQ KGCKKIMVLY  360
KSSKKGSKAN KSNWVMHQYH LGTEDGEKEG ESGSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14490.1	3e-53	NAC family protein