PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g806900.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 220aa    MW: 24520.2 Da    PI: 5.6248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g806900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.35.7e-16105158255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtae...eAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ t+e   +A  a+++a+ k++g
  Pd.00g806900.m01 105 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETPEdaeDAGLAYDRAAFKIRG 158
                       7********.***********9987..**********9866688889****999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MYGETTLELE SNLALLESIR HHLLDDLEPQ ATSFSGNNVP TFPFFLTENW WESSLEAECA  60
DNTMQDMLEA LHDVNYVGCV VSNDEVQLKE QVAEGAVHAP REERHYRGVR RRPWGKFAAE  120
IRDPAKNGAR VWLGTYETPE DAEDAGLAYD RAAFKIRGCK AKLNFPHLIG SSNVEPVRVT  180
PKRRRSPDQC SSSSSSAYTS DNGSSKPKRR AAGVDNHLAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1182208KRRRSPDQCSSSSSSAYTSDNGSSKPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-36ERF family protein