PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g810770.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 231aa MW: 26168.3 Da PI: 8.9645

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g810770.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.9	5.4e-14	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l d+++ +G+g W+++ + g++R +k+c++rw +yl Pd.00g810770.m01 9 KGLWTVEEDRILMDYIRVHGKGKWNRVNKVTGLKRGGKSCRLRWMNYL 56 678***************************99**********97 PP
2	Myb_DNA-binding	60	5e-19	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eEd+l+++++++lG++ W++Ia +++ gRt++q+k++w+++l Pd.00g810770.m01 62 RGDFSEEEDDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 107 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MEGGNEYKKG LWTVEEDRIL MDYIRVHGKG KWNRVNKVTG LKRGGKSCRL RWMNYLSPSV 60 KRGDFSEEED DLIIRLHNLL GNRWSLIAGR VPGRTDNQVK NHWNTHLSKK LGVNSKKGKA 120 KAKTSLGSEQ VKGSFCTASE SNSEQQPQPN SNSNIGDHEA ASAAGFDDKL MMIKDNIGSK 180 SGVGFSGMWE AMMNNNNYDS SFWFYNDDLN LNSPYYLLDP SLDDHHYPLQ F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	6e-69	MYB family protein