PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g812310.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 928aa MW: 103196 Da PI: 7.0669

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g812310.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.2	7.4e-12	627	683	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ ++k+ + g ++++e Aa ++ a++k++g Pd.00g812310.m01 627 SIYRGVTRHRWTGRFEAHLWDkSSWNNiQNKKGRQGAYDSEEAAAHTYDLAALKYWG 683 57*****************777799988888********************98 PP
2	AP2	51.2	3e-16	726	778	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a+++a+ +++g+ Pd.00g812310.m01 726 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDRAAIEYRGA 778 89**99******99966...3.6***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 928 aa Download sequence
MAVSAFKSSS KRSNAATSSS TSTTSSVGRQ QITDKDNNNP AKKAPLRRSR SVSAFSRTSL 60 DVSAESFLNK RDNPLFWSTD AQAVDPQKLV KPTKLDAATS KDSRPATSAG ADSRRGRSGL 120 RNSDALGTRK EAGRSLSRVD PSSRNRSLSR GPDSRRHFVS SKSDDEQVWG SLNKVGSDGK 180 KGALVRSSSD ELDELKGLRT WSSQHSQDSD ANLSCLQSTN WEDGVSVAGS LSGAEEKAVK 240 AVCERMNMDL GHSHLSVQGK HLEDDNQSTS IYETVRSEVR RAISEIQNDL ESAMRRSNTP 300 ALATTDIADI PPDLVNPSAV ELVLDIRREY AKKLEQSRER SRKLQSDLAV EEHRGQELSR 360 ILKEVLPDPK TSNVPKSRPG RKASIERRKM SKRLTEEAMS YFDECVSLST FDSSDFSSPE 420 DPPLNLVGFT TPVGKSTSLL QASSTAAVTN KSNSCHNDKQ GLSIENQYTD DRHASGLMAS 480 SGLREPQISP NSANMPQDWK FSFAHKPTET LELQPDIMKY ARHFEKGIEK DDSELQTVRS 540 NYYDLGEYNL QAAAQSYMFD RVLYRNRIES GDILLCGNGI SGPETPHLNQ AENQKPKAKR 600 IRKNQNNPTE KCQNGTNPNT GGGRRSSIYR GVTRHRWTGR FEAHLWDKSS WNNIQNKKGR 660 QGAYDSEEAA AHTYDLAALK YWGPGTTLNF PIETYTKELE EMQKASREEY LASLRRRSSG 720 FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT QEEAAAAYDR AAIEYRGANA 780 VTNFDINNYI DKFKKESEET PPKCFDAGLP EDEKYPHLLH CIESNTMDQV MDAADEHKFT 840 WNFLDTGLMA QLPVPDIPLD NKPLELPDFF EDLRFEENFD LIFGAAGDAD LGGLMESAGC 900 GVEEGVPRNL EDNRSSSSPS STTTSVSF

Sequence ? help Back to Top

Protein Sequence Length: 928 aa Download sequence

MAVSAFKSSS KRSNAATSSS TSTTSSVGRQ QITDKDNNNP AKKAPLRRSR SVSAFSRTSL  60
DVSAESFLNK RDNPLFWSTD AQAVDPQKLV KPTKLDAATS KDSRPATSAG ADSRRGRSGL  120
RNSDALGTRK EAGRSLSRVD PSSRNRSLSR GPDSRRHFVS SKSDDEQVWG SLNKVGSDGK  180
KGALVRSSSD ELDELKGLRT WSSQHSQDSD ANLSCLQSTN WEDGVSVAGS LSGAEEKAVK  240
AVCERMNMDL GHSHLSVQGK HLEDDNQSTS IYETVRSEVR RAISEIQNDL ESAMRRSNTP  300
ALATTDIADI PPDLVNPSAV ELVLDIRREY AKKLEQSRER SRKLQSDLAV EEHRGQELSR  360
ILKEVLPDPK TSNVPKSRPG RKASIERRKM SKRLTEEAMS YFDECVSLST FDSSDFSSPE  420
DPPLNLVGFT TPVGKSTSLL QASSTAAVTN KSNSCHNDKQ GLSIENQYTD DRHASGLMAS  480
SGLREPQISP NSANMPQDWK FSFAHKPTET LELQPDIMKY ARHFEKGIEK DDSELQTVRS  540
NYYDLGEYNL QAAAQSYMFD RVLYRNRIES GDILLCGNGI SGPETPHLNQ AENQKPKAKR  600
IRKNQNNPTE KCQNGTNPNT GGGRRSSIYR GVTRHRWTGR FEAHLWDKSS WNNIQNKKGR  660
QGAYDSEEAA AHTYDLAALK YWGPGTTLNF PIETYTKELE EMQKASREEY LASLRRRSSG  720
FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT QEEAAAAYDR AAIEYRGANA  780
VTNFDINNYI DKFKKESEET PPKCFDAGLP EDEKYPHLLH CIESNTMDQV MDAADEHKFT  840
WNFLDTGLMA QLPVPDIPLD NKPLELPDFF EDLRFEENFD LIFGAAGDAD LGGLMESAGC  900
GVEEGVPRNL EDNRSSSSPS STTTSVSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.1	5e-85	AP2 family protein