PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g814390.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 389aa MW: 42573.2 Da PI: 6.8566

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g814390.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.4e-18	43	90	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l ++v+++G g+W+++ r g++R++k+c++rw ++l Pd.00g814390.m01 43 KGPWTAVEDQILMEYVRKHGEGNWNAVQRNSGLNRCGKSCRLRWANHL 90 79******************************************9986 PP
2	Myb_DNA-binding	22.3	3.1e-07	96	128	1	35
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgR 35 +g+++++E+ l++++++++G++ W++ a+ ++ Pd.00g814390.m01 96 KGAFSPDEERLILELHAKYGNK-WARMASQST-TL 128 799*****************.*998765.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MTPSSSNNNS GLLQQSEGRS PQELSGRGGG GGDVVEGSRG LKKGPWTAVE DQILMEYVRK 60 HGEGNWNAVQ RNSGLNRCGK SCRLRWANHL RPNLKKGAFS PDEERLILEL HAKYGNKWAR 120 MASQSTTLTS LPLFDPSNPT TTSSFSSFTF HRPAPILGAP VRYKRYRDSV GFSPPVSPTP 180 QRSTSILRAN SMPDIASSHL TSTNSMPESA AFQFPRTLNP SLPPLPSSRP QFEYSESFLS 240 STGSVYSVKS ELPSSQVSQT QSEVTIDTKR ANGLFSSFEE KHVLDNYTRW LQSTSSMEGS 300 LLEAKPIQDD HISSLPEDLS KLFSFIPSTE PISDWYSDSG ELSNGHSSGV TDACLDFDMQ 360 QHMASLFPVT ATAEHGKASS SWDNLPGIC

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MTPSSSNNNS GLLQQSEGRS PQELSGRGGG GGDVVEGSRG LKKGPWTAVE DQILMEYVRK  60
HGEGNWNAVQ RNSGLNRCGK SCRLRWANHL RPNLKKGAFS PDEERLILEL HAKYGNKWAR  120
MASQSTTLTS LPLFDPSNPT TTSSFSSFTF HRPAPILGAP VRYKRYRDSV GFSPPVSPTP  180
QRSTSILRAN SMPDIASSHL TSTNSMPESA AFQFPRTLNP SLPPLPSSRP QFEYSESFLS  240
STGSVYSVKS ELPSSQVSQT QSEVTIDTKR ANGLFSSFEE KHVLDNYTRW LQSTSSMEGS  300
LLEAKPIQDD HISSLPEDLS KLFSFIPSTE PISDWYSDSG ELSNGHSSGV TDACLDFDMQ  360
QHMASLFPVT ATAEHGKASS SWDNLPGIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	9e-47	MYB family protein