PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g821310.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 352aa MW: 39424.2 Da PI: 9.0258

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g821310.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	35	2.5e-11	200	297	4	82
E-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS................-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT CS B3 4 vltpsdvlks.grlvlpkkfaeehggkkeesktltledesg................rsWevkliyrkksgr..yvltkGWkeFvkangLkeg 77 +l dv + +r+++p k ++e ++++ +++l+l++ ++ ++++++l+ + +g+ y l +GW+e +kan+Lk+g Pd.00g821310.m01 200 ELFDTDVADNnQRFSIPMKQVKEDFLSEKDQTELKLRNGHNqkhlvgipvkvldpslKEYNLRLKKWTMGGSivYNLVSGWREIAKANKLKTG 292 55555665553899********777777788888888888888888888888888***88888888779999************* PP -EEEE CS B3 78 DfvvF 82 D++ + Pd.00g821310.m01 293 DTLQL 297 *9866 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MKGDFQFGPD SNSLNLLSEV SVVVKNWEED DVEKAMAMAV RSCCCNPLHG YGFDGCLIPQ 60 KAMVKQSKRV FSSSSSSSSS LDMLAEVATQ QLMELGNGNG LTTKWVFDEE AVLAEFISFC 120 AKKKRSEFKT FHFSDINIPK KKRSNMRTQR RFLPLASHDS VLSISYVKSP SSLKREMPQD 180 MKNRISSIGG GDLKLVIEKE LFDTDVADNN QRFSIPMKQV KEDFLSEKDQ TELKLRNGHN 240 QKHLVGIPVK VLDPSLKEYN LRLKKWTMGG SIVYNLVSGW REIAKANKLK TGDTLQLWSF 300 RDDSNKLGFA LVKVSTTTME VDQSGPGART SSQNGCSLSC IKDLAIKEDM FT

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MKGDFQFGPD SNSLNLLSEV SVVVKNWEED DVEKAMAMAV RSCCCNPLHG YGFDGCLIPQ  60
KAMVKQSKRV FSSSSSSSSS LDMLAEVATQ QLMELGNGNG LTTKWVFDEE AVLAEFISFC  120
AKKKRSEFKT FHFSDINIPK KKRSNMRTQR RFLPLASHDS VLSISYVKSP SSLKREMPQD  180
MKNRISSIGG GDLKLVIEKE LFDTDVADNN QRFSIPMKQV KEDFLSEKDQ TELKLRNGHN  240
QKHLVGIPVK VLDPSLKEYN LRLKKWTMGG SIVYNLVSGW REIAKANKLK TGDTLQLWSF  300
RDDSNKLGFA LVKVSTTTME VDQSGPGART SSQNGCSLSC IKDLAIKEDM FT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	143	KKKRSEFKTFHFSDINIPKKKR
2	123	144	KKKRSEFKTFHFSDINIPKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05930.1	1e-13	B3 family protein