PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g821950.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family M-type_MADS
Protein Properties Length: 123aa    MW: 14205.8 Da    PI: 10.71
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g821950.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF74.58.5e-2469112851
                       HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   8 nrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                        rqvtfskRr g++KKA ELSvLC+ evav+ifs t+kl++yss
  Pd.00g821950.m01  69 ARQVTFSKRRRGLFKKAAELSVLCESEVAVVIFSATDKLFDYSS 112
                       69****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MLRFALSRYK INGGDCMHQR QGASVPVDLL RPKLQTGLKP QQDLGTIKRE MVKMMREKIK  60
IKKIDYLPAR QVTFSKRRRG LFKKAAELSV LCESEVAVVI FSATDKLFDY SSSRYQHPPL  120
YTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24540.12e-21MIKC_MADS family protein