PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g822200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 191aa    MW: 21330.9 Da    PI: 5.2865
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g822200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.18.3e-183477146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg +++eE++l+++++++lG++ W++Ia +++ gRt++q+k++w++
  Pd.00g822200.m01 34 RGDFSEEEEDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNYWNT 77
                      899*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MEVAAGIAFL SSPVRPYQHL KTSLSDYLSP NVKRGDFSEE EEDLIIRLHN LLGNRWSLIA  60
GRVPGRTDNQ VKNYWNTRLC KKLGFKKQTP KALASSSETP KGPDSNSKQS CSCGTSSTVK  120
DMEALQNNQN PLLDDIVAAE DSNSNEEIQW MTEHCAESLS CSNGHNLISW GMLEFLQGHP  180
LELLYQNFEL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.13e-34MYB family protein