PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g826990.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 206aa    MW: 22843.2 Da    PI: 4.512
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g826990.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.87.5e-1019571655
               AP2 16 vAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +A+I   +  n+ +k+ +lg++ t eeAa+a++ a+ +++g
  Pd.00g826990.m01 19 RARIGRvF-GNN-KKYLYLGTYSTQEEAARAYDIAAIEYRG 57
                      57777745.343.7*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MFVWSMQKFD QIYEMERSRA RIGRVFGNNK KYLYLGTYST QEEAARAYDI AAIEYRGISA  60
VTNFDLTTSQ QRSLSHTQIL LPLITSTPPR KQEVIGSNIP LNTGSKSSSP TALGLLLQSS  120
IFRELVQKNS NFSEDESTDG EETKDQPQVG SDDEFGGIFY DGIGDNPFAC SSNSDGDNKP  180
WSSITSTILL NQPTKANASD SLFFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.19e-18AP2 family protein