PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g827610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 132aa    MW: 14766 Da    PI: 9.6026
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g827610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.81.3e-1370113855
               AP2   8 wdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +++ +grW+A+I   +   g +k+ +l ++gt eeAa+a++ a+ +++g
  Pd.00g827610.m01  70 YHH-NGRWEARIGRvF---G-NKYLYLCTYGTQEEAARAYDIAAIEYRG 113
                       566.8******99966...3.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MASLILGAFQ SPFKRSPSAL ALPYPFLSPP PQLRFQSPQL PLHQSLQCTT VGAIRKPKEE  60
NVSITLMAMY HHNGRWEARI GRVFGNKYLY LCTYGTQEEA ARAYDIAAIE YRGISAVTNF  120
DLSSYISLPS PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.28e-27ERF family protein