PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g828260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 299aa    MW: 34384.3 Da    PI: 7.5547
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g828260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.000411437223
                      EETTTTEEESSHHHHHHHHHH..T CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirt..H 23
                      kC  C + F+  ++L+ H+rt  H
  Pd.00g828260.m01 14 KCAACYRQFNKIEHLVEHMRTsyH 37
                      6999****************9777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDYRVETSET LRNKCAACYR QFNKIEHLVE HMRTSYHSAH EPTCGIWPLP KQECRNIFST  60
RGCKFCLAIL DSPYALRVHQ DRCQLSGANA GLLGRFANLG IRDNTENCST RGTQVVALAC  120
KMVGGGSDGS LDLCAKVCLI DEYENIIFQS YVKPLLPVTN YRDAMPLRQV QKKIQDFLCN  180
GEPMWKIRPR GGKARILVGH GLDHDLDSLQ VEYPQVMIRY DIQTGIQDPY EDCVATMKLY  240
MRMRSQVHKT EAYPLASDPQ NRNNFASWRQ NELERMSPEQ MLEASRSDYY CWCLDSRDM