PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g828500.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 179aa    MW: 20214.5 Da    PI: 9.1123
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g828500.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding537.8e-1779125148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g WT++Ed llv++v ++G + W+ Ia+++  gR +kqc++rw+++l
  Pd.00g828500.m01  79 KGQWTPQEDRLLVQLVGRFGIKKWSQIAKMLS-GRVGKQCRERWHNHL 125
                       799*****************************.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MGPQSCIQLP PLINFGELGS SSAMAISLPS DEVTCNSSSS TEIEFCKRLS ADDQKKTKRL  60
CMRRPTSSKV LQKKPSIIKG QWTPQEDRLL VQLVGRFGIK KWSQIAKMLS GRVGKQCRER  120
WHNHLRPDIR VTGVEEYRGN SMEAEMPLAL EVKSLMQGPD DDHVKKEMDL LEMICQGKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27785.11e-32MYB family protein