PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g829570.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 645aa MW: 74103.1 Da PI: 8.3255

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g829570.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.8	7.4e-23	278	364	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y++YA GFsvrk+ +ks+ ng +++r+++C+++g+r ++++ + r++r+etrtgC a++++ ++ +gk++vt++e +HnHe++ Pd.00g829570.m01 278 CYSRYAVLEGFSVRKDFVNKSRINGIVVSRRYTCYRQGYRPIQHNA--NVRKSRQETRTGCLAHMTIARQPNGKFCVTHFEPKHNHEFV 364 7***************************************9988..9999********************************986 PP
2	FAR1	91.1	1.4e-28	412	500	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA ++GFsvrk++ ++sk ng++++r+f+C +eg+r+++k++ + +r+r+etr+gC a+l+++++ d++++vt++e++HnHel+ Pd.00g829570.m01 412 EFYNTYAGRIGFSVRKDYVNRSKINGSVVSRRFTCFREGFRQRDKRD-MNVKRPRKETRIGCLAQLVISRQPDDRYRVTHFEEKHNHELV 500 6*****************************************999.99************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
MKREGRQHGM VRTYRVLPDP LNPRPETRHV NRSDSPPTAG LFTKVTTKPT NHSKFTGKCG 60 KPRCTECHIH PASKAKDKTK GNHKLKSSDV LSNHRLQNFS PFPFLFFPFH TLRWMGCSEP 120 DISSHPQEES DYNELPTSFR LDIDVQRDCR SSKDSCAERS QAVIDHEHDS PRECQSPKGS 180 SFEKRLVVID TEQEYQSPIP SSIDKNQVDI DCEECETPKF YSVSKFEMDV DGELELQSPN 240 VPCADVPGAG MAMKGEEYIY VVPQIGVEFE SEDHAYNCYS RYAVLEGFSV RKDFVNKSRI 300 NGIVVSRRYT CYRQGYRPIQ HNANVRKSRQ ETRTGCLAHM TIARQPNGKF CVTHFEPKHN 360 HEFVAPCTTY LLPSQKRLNF AQAVEADLGD KSGIDGVPKL GMGFDSEDHA YEFYNTYAGR 420 IGFSVRKDYV NRSKINGSVV SRRFTCFREG FRQRDKRDMN VKRPRKETRI GCLAQLVISR 480 QPDDRYRVTH FEEKHNHELV AACRVHMLRS QKRLIAAQVF EGDLVDCSNM QPESASELIH 540 SDVLLLCKHL GKVINDWHYK ELEGNYNMHH HLPELMGDVI LLKHARNMYT PMIFELFQQE 600 GGVKMLGSEI MDGSHLGHCI GRHLHCCFYR RKSLSICLKL SLGRY

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

MKREGRQHGM VRTYRVLPDP LNPRPETRHV NRSDSPPTAG LFTKVTTKPT NHSKFTGKCG  60
KPRCTECHIH PASKAKDKTK GNHKLKSSDV LSNHRLQNFS PFPFLFFPFH TLRWMGCSEP  120
DISSHPQEES DYNELPTSFR LDIDVQRDCR SSKDSCAERS QAVIDHEHDS PRECQSPKGS  180
SFEKRLVVID TEQEYQSPIP SSIDKNQVDI DCEECETPKF YSVSKFEMDV DGELELQSPN  240
VPCADVPGAG MAMKGEEYIY VVPQIGVEFE SEDHAYNCYS RYAVLEGFSV RKDFVNKSRI  300
NGIVVSRRYT CYRQGYRPIQ HNANVRKSRQ ETRTGCLAHM TIARQPNGKF CVTHFEPKHN  360
HEFVAPCTTY LLPSQKRLNF AQAVEADLGD KSGIDGVPKL GMGFDSEDHA YEFYNTYAGR  420
IGFSVRKDYV NRSKINGSVV SRRFTCFREG FRQRDKRDMN VKRPRKETRI GCLAQLVISR  480
QPDDRYRVTH FEEKHNHELV AACRVHMLRS QKRLIAAQVF EGDLVDCSNM QPESASELIH  540
SDVLLLCKHL GKVINDWHYK ELEGNYNMHH HLPELMGDVI LLKHARNMYT PMIFELFQQE  600
GGVKMLGSEI MDGSHLGHCI GRHLHCCFYR RKSLSICLKL SLGRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	4e-28	FAR1 family protein