PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g829750.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 293aa    MW: 32995 Da    PI: 5.5036
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g829750.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.65.6e-121473886
          trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                      mre+gf rsp++C++kw+nl k++kk +++ k +   +s +++y+++l+
  Pd.00g829750.m01  1 MREKGFDRSPTMCTDKWRNLLKEFKKARHQVKVG--SRSAKMSYYEDLQ 47
                      89******************************98..45568*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MREKGFDRSP TMCTDKWRNL LKEFKKARHQ VKVGSRSAKM SYYEDLQDLL RDRTNNDHNA  60
ASTDAATASA AAYKSPTPPK LESFVRFCDK GLEDSGIPFG PMEATDRSAL NLERQLDHDG  120
DPLAITAADT VAVSGVPPWN WREGPGNGGE GHSSYCGKII TVKLGEYTRR IGIDGTADAI  180
KEAIKSAFRI RTKRAFWLED EDQVVRSLDR DMPLGNYTLH LDEGITIKLC LYDDSDRIVR  240
TEEITLYTED DFRDFLARRG LMGLRELSGY RRIDTLDELQ SGAMYQGVRL LGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.11e-120Trihelix family protein