PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g833380.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 258aa    MW: 29135.2 Da    PI: 10.5708
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g833380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.54.8e-1157107146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 
                       +++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
  Pd.00g833380.m01  57 KQKWTAEEEAALKAGVLKHGAGKWRTILTDPEfnsilHLRSNVDLKDKWRN 107
                       79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MVQTWMVFSV IFSDPDLPIC IANSFHGFDV NLLRVQNLTG QISFWKIFGL WLMGAPKQKW  60
TAEEEAALKA GVLKHGAGKW RTILTDPEFN SILHLRSNVD LKDKWRNINV TAIWGSRQKA  120
KLALKRNLPN PKHDNNPLAV STVIQSHEEI VDAKPLAISG GKLQTTESKQ PIARLDHLIL  180
EAITNLKELG GSDRAAIAMY IEEQYWAPPN LKKLLSSKLK HMVANGKLIK VKHRYRIAPT  240
MKALKCRRLD LDMKLAHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.17e-68MYB_related family protein