PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g836880.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 181aa    MW: 20229.6 Da    PI: 9.7575
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g836880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2110.00134062123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C+ C++ F++   L  H  +H
  Pd.00g836880.m01 40 FECKTCNRKFPSFQALGGHRASH 62
                      89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MREDEVGLGM KGLDMEKFLM LLSCGMETKF RKCSSPNDVF ECKTCNRKFP SFQALGGHRA  60
SHKRPRTSMD HDQQSETRKG SNLMATKNKP KAHLCSICGL EFGMGQALGG HMRRHRASNM  120
NLGFSSKVPD EVVVASKIPV MKRSSSKRIM CLEMDLNLTP LENDLKLLFG EMAPKVDAFV  180
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.12e-40C2H2 family protein