PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g837410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 166aa MW: 18408 Da PI: 8.3676

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g837410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	56.6	5.6e-18	115	164	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+r +W + L e+F+ a++++ G ++AtPk+ile+m+ ++Lt+++v+SHLQ Pd.00g837410.m01 115 KKRCEWKKSLEEKFMLAITHI-GLDNATPKRILEFMNEPDLTIKNVASHLQ 164 689****************.*************************** PP
2	Myb_DNA-binding	23	1.9e-07	117	165	1	46
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqk 46 r W + ++e++ a++ G + t+k+I + m+ +t k++ s++q Pd.00g837410.m01 117 RCEWKKSLEEKFMLAITHIGLDnaTPKRILEFMNePDLTIKNVASHLQV 165 568********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MASKSVLIVA LLFSVLILCL QGTYADRIQG WEGGHARFYG GADAFAIIAG GGFGNGNWDS 60 QGYGFSSGSC YELKCDGGPK WCLTGDEEKQ EKRAKRGRKR SREGDDEERT AAPRKKRCEW 120 KKSLEEKFML AITHIGLDNA TPKRILEFMN EPDLTIKNVA SHLQVC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	117	RKRSREGDDEERTAAPRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07210.1	2e-17	ARR-B family protein