PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g837580.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 259aa    MW: 28297.3 Da    PI: 10.4788
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g837580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP48.22.8e-154344878
                      SEEETTT--SS--S-STTTT-------S--- CS
               SBP 48 rfhelsefDeekrsCrrrLakhnerrrkkqa 78
                      rfh+l efD++krsCrrrLa+hnerrrk+q+
  Pd.00g837580.m01  4 RFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 34
                      9***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MRKRFHQLPE FDQGKRSCRR RLAGHNERRR KPQPGSVLSA RFGRLSSSIY ENSSRVGSFL  60
MDFTAYPRHS GRDAWATTRT SERVPGNQNS NDTGKFLQHP WQSNSEITPS GLYLQGSAGG  120
TSYPGPGIPP GECVTGVTDS SCALSLLSSQ PWGSRNRVSG VGMNTVINTQ GPPVGQPITH  180
AGTSNHFPTT SWGFKGNAGS SSHEMLPDLG LGQMSQPPLS TQYSGVLELS QQSSRRQQQM  240
ELGHTRGYDT SSQHIHWSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.18e-36SBP family protein