PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g839750.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 587aa MW: 64773.5 Da PI: 7.5552

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g839750.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.3	9.6e-25	165	215	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL +A+Pk+il+lm+v+ Lt+e+v+SHLQkYRl Pd.00g839750.m01 165 KPRVVWSLELHRKFVAAVNQL----EAVPKKILDLMNVEKLTRENVASHLQKYRL 215 79*****************....9**************************8 PP
2	Myb_DNA-binding	37.2	6.6e-12	167	214	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+ql +k+I m+ +++t++++ s++qky+ Pd.00g839750.m01 167 RVVWSLELHRKFVAAVNQLEAV-PKKILDLMNvEKLTRENVASHLQKYR 214 678***************99.******99***********7 PP
3	Response_reg	78.2	2.8e-26	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ ++ll +l++ +y +v++++++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+ +++ + + Pd.00g839750.m01 20 VLAVDDDPICLKLLDALLRRCKY-HVTTTSQAITALKLLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDTKLVMKGIT 110 799******************.***********888888***************87754.558**************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ +e+l + Pd.00g839750.m01 111 HGACDYLLKPVRIEQLKN 128 *************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MTVEGVLDEP RDQFPIGMRV LAVDDDPICL KLLDALLRRC KYHVTTTSQA ITALKLLREN 60 KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DTKLVMKGIT HGACDYLLKP 120 VRIEQLKNIW QHVIRRKKVD SKDQNSCNQE KSHVGNGEGG PGSKKPRVVW SLELHRKFVA 180 AVNQLEAVPK KILDLMNVEK LTRENVASHL QKYRLYLKRI SRVANQQANM VAALGTSDSS 240 YLRMTSVNGV GNFHPLTGPG QFHNNAFRSF PPSGMVGRLN TPAGLGLHCL PSSGMFQLSH 300 AQNPSNSIND QPLIFPGNCN GNILPAPLEL DQQHGTEAAC VADFSAAING TTVYPTSGGL 360 PDAKSSVSRA SLRSELSPPF LDHGRLNDNW SSASQPSMFC SNSFSSRDSF KQPTLLQSNL 420 KDNMPVMSSQ IGSSQIDVSI SCQSQDSRFG LPIQASAISN NSGQTINNDP FQGWDDHKPD 480 SQYPSDVMCT SMNSLMPVND TVAPFDQNSD SRRTTFQRNM GFNSIGQSNF LDPLLMKYDD 540 VELTQDASLK MRPGYLMDQR KLQGGYNPNN VGSLDELVSA MMKQERR

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MTVEGVLDEP RDQFPIGMRV LAVDDDPICL KLLDALLRRC KYHVTTTSQA ITALKLLREN  60
KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DTKLVMKGIT HGACDYLLKP  120
VRIEQLKNIW QHVIRRKKVD SKDQNSCNQE KSHVGNGEGG PGSKKPRVVW SLELHRKFVA  180
AVNQLEAVPK KILDLMNVEK LTRENVASHL QKYRLYLKRI SRVANQQANM VAALGTSDSS  240
YLRMTSVNGV GNFHPLTGPG QFHNNAFRSF PPSGMVGRLN TPAGLGLHCL PSSGMFQLSH  300
AQNPSNSIND QPLIFPGNCN GNILPAPLEL DQQHGTEAAC VADFSAAING TTVYPTSGGL  360
PDAKSSVSRA SLRSELSPPF LDHGRLNDNW SSASQPSMFC SNSFSSRDSF KQPTLLQSNL  420
KDNMPVMSSQ IGSSQIDVSI SCQSQDSRFG LPIQASAISN NSGQTINNDP FQGWDDHKPD  480
SQYPSDVMCT SMNSLMPVND TVAPFDQNSD SRRTTFQRNM GFNSIGQSNF LDPLLMKYDD  540
VELTQDASLK MRPGYLMDQR KLQGGYNPNN VGSLDELVSA MMKQERR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	214	223	RLYLKRISRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-128	ARR-B family protein