PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g840150.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 224aa    MW: 26023.5 Da    PI: 6.6363
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g840150.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH278.3e-093280555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         +E++RR++++  +++L +llP +  ++++ l   +   +A++YIk+L+
  Pd.00g840150.m01 32 RRVIEKNRRNQMKVLYSKLNSLLPRQ--NSQEPLCLPDQIDEAINYIKNLE 80
                      5689*********************6..26666***************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGSFVANLEE RDHQIPMDRN QGSQSSSTKV ERRVIEKNRR NQMKVLYSKL NSLLPRQNSQ  60
EPLCLPDQID EAINYIKNLE SKLQKSKEKR DSLKGNRKRS HTACTNLDSM RSSKPPQIEI  120
HEMGSTLEVV LISGLDNHQF MFTEIIRILH EEQADVVHVS LSTLGDSIFH VIRAEMGKYM  180
LDFGAAKITE KLRRFVNGST SDEELQREYL WDFEIYPETI WDQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18999KRDSLKGNRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-41bHLH family protein