PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g846200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 187aa    MW: 21399 Da    PI: 8.0429
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g846200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.81.7e-2327114290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                        Yn+YA++vGFsvr+ +++++ +++   +  + Cskeg+r +++++ e ++ ++ etr+gCka+++   ++ d+ w+v++++ eHnHela
  Pd.00g846200.m01  27 LYNNYATRVGFSVRRGQKRYN-TKKVLRQFSYLCSKEGFRLDSDTS-ELSNVSKLETRIGCKASIRFAFQDeDDMWKVSHFVPEHNHELA 114
                       7****************9998.66779999************9999.99999****************9999****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MIVNRVENID EDLLGRVVST EEEAYNLYNN YATRVGFSVR RGQKRYNTKK VLRQFSYLCS  60
KEGFRLDSDT SELSNVSKLE TRIGCKASIR FAFQDEDDMW KVSHFVPEHN HELAKPEERQ  120
FLRSNRKVSD SNLGVIKTMV GAGIRTTNTY SYLAEEVGGS QNVGFTKRDC YNVVNKEKMA  180
MIEAGDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-26FAR1 family protein