PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g847100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 241aa    MW: 27194.7 Da    PI: 7.3217
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g847100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.24e-1570121155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       ++ +hn+ Er RR+++Ns ++ Lr+llP +   ++kKls   +  ++ +YI +Lq
  Pd.00g847100.m01  70 KKLNHNASERDRRKKMNSLYSSLRSLLPAD---QGKKLSIPNTISHVLKYIPELQ 121
                       6789**************************...*******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MLALSPPLFS TIAWPSEDLL SHEQNYYYRD SSTDQSAGSF LHILPSHHPQ VDLDRSTTIS  60
GDYSGVTMEK KLNHNASERD RRKKMNSLYS SLRSLLPADQ GKKLSIPNTI SHVLKYIPEL  120
QKQVEGLIQN REELLSRACK QEAAMHEEKQ IKSTARSSLS AVSTYRLSDR AVAIQISTLK  180
THNNLLSAIL LNLEEEGLQV LNASSFQSSG GRVFYNIHLQ VERADRLECE NLSEKLMSFY  240
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-61bHLH family protein