PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g849300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 365aa MW: 40712.6 Da PI: 5.7204

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g849300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29	3.4e-09	107	178	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y+++v s+ + + +++k +g i++ +f Cs+e +++++ ++ C+a+l+++++ + w+ tk++++HnH+++ Pd.00g849300.m01 107 YDAYSRHV--STHVGQFSRTKPDGPIVTWDFACSREVFKRKNVES--------------CNAMLRIERKGANSWVATKFVEDHNHSMV 178 77777777..778888889999**************9998877..............************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MVSGFSADGN YAVVIVLGEE EIEKWVLVNN HLHLGFWIEK TVMDTEVVVD VEGENMEHHM 60 EENTEPGEKQ NVNQNFAGRE MSIQDDGNTK PHVGMEFESE EAAKTLYDAY SRHVSTHVGQ 120 FSRTKPDGPI VTWDFACSRE VFKRKNVESC NAMLRIERKG ANSWVATKFV EDHNHSMVSP 180 SKVHYLRPRR HFAGATKNAA ETLDATTDVY FATEGNVSYE PNRGALPHRF NLNDGGVPVA 240 DLNQPSMAPV SIHPDGAHPD NTVVLTCFKS MAWIIENKNS TSAGKVAVIN LKLQDYGKNP 300 AGETEVQFRL TRVTLEPMLR SMAYISQQLS APANRVAVIN LKLQDTKTTS GETEVNYDKS 360 SFILI

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MVSGFSADGN YAVVIVLGEE EIEKWVLVNN HLHLGFWIEK TVMDTEVVVD VEGENMEHHM  60
EENTEPGEKQ NVNQNFAGRE MSIQDDGNTK PHVGMEFESE EAAKTLYDAY SRHVSTHVGQ  120
FSRTKPDGPI VTWDFACSRE VFKRKNVESC NAMLRIERKG ANSWVATKFV EDHNHSMVSP  180
SKVHYLRPRR HFAGATKNAA ETLDATTDVY FATEGNVSYE PNRGALPHRF NLNDGGVPVA  240
DLNQPSMAPV SIHPDGAHPD NTVVLTCFKS MAWIIENKNS TSAGKVAVIN LKLQDYGKNP  300
AGETEVQFRL TRVTLEPMLR SMAYISQQLS APANRVAVIN LKLQDTKTTS GETEVNYDKS  360
SFILI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	1e-51	FAR1 family protein