PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g852600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 231aa    MW: 25810.6 Da    PI: 8.6001
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g852600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP69.21.3e-21166205241
               TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGf 41 
                        g kdrhski+T++g+RdRR+Rls+++a++fFdLqd+LG+
  Pd.00g852600.m01 166 SGNKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGY 205
                       578************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MFPSSSSASN YQLPFPCDTN QQPQLLEKSS TNIIDQHGHE NPNSISHDDH HIPQYYSHYS  60
EDHQQQAPNN FLEHDGLLLS YLLSQQQLLV GSSSPNMNSA TSHHVQVHDT TEISVVASNS  120
NKKVLDRVDE GRTAPAATSK GCSSKKKSNT SNGESKNAKA PRKRSSGNKD RHSKIYTAQG  180
PRDRRMRLSL QIARKFFDLQ DMLGYICVQL MRNKPVSAIY EGECYQALAP V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.13e-19TCP family protein