PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g853090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 149aa    MW: 17303.2 Da    PI: 6.2781
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g853090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3102.22.9e-3232122186
                       EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.g 86 
                       f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g++W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g
  Pd.00g853090.m01  32 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRNGKQWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGlG 122
                       89***************************966778999*************************************************5423 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MDSSPRDRDN NEEDDGSRRE ENPIAIEREH MFDKVVTPSD VGKLNRLVIP KQHAEKYFPL  60
DSSTNEKGLL LNFEDRNGKQ WRFRYSYWNS SQSYVMTKGW SRFVKEKKLD AGDIVSFQRG  120
LGDTTTDFLS IRGKHQASSP FSMSLDFDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.16e-63B3 family protein