PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g855730.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 200aa    MW: 22343.1 Da    PI: 4.8579
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g855730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.96e-144393256
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                       ykGVr+  + g+Wv+e+r p     k+ r++lg+f  ++ Aa+a++ a+++l+ge
  Pd.00g855730.m01 43 IYKGVRQ--RCGKWVCELRQP---DqKKSRIWLGTFTCPDRAARAYDVAALALKGE 93
                      69***86..47******9998...3357*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MTDFTDDASS SSNRVSAQAH LQSVEFKKRK AGRKKFNETR HPIYKGVRQR CGKWVCELRQ  60
PDQKKSRIWL GTFTCPDRAA RAYDVAALAL KGESAALNFP HEASTLPRIA STCSVKDLQC  120
AAAEAADGFF EVEVKASGLE EKVEEQVLYL DEEELFNMPG LIDSLAEGLI LTPPAMQKGF  180
NWNDFDDGME NVVDFSLWSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.11e-41ERF family protein