PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g861370.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 200aa    MW: 23564.1 Da    PI: 10.7105
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g861370.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.1e-16101160155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV++++++gr++A+++d  ++  g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  Pd.00g861370.m01 101 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 160
                       78*******************988886678446*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MVQQAWRWWQ SWLGLRWAQK EGMWCFRISM DLPRLSMMVK LSSNRLSWRT LWRMLEDHVE  60
NVGVKLVRQA GAKTKKRGGG KLSQKQPVHR KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW  120
DNSCKKEGQT RKGRQVYLGG YDMEEKAARA YDLAALKYWG SATHINFPLE NYTAQLEEMM  180
NMSRQEYVAH MRSGISLCGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.17e-64AP2 family protein