PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g863530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 412aa MW: 45983 Da PI: 5.0812

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g863530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.8	7e-17	67	143	15	99
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 l lp f+++h + +++t+tledesgr+ ++k+i k++ l++GW++F+ +++L egD++vF+l++ ++f +v ++r+ Pd.00g863530.m01 67 SLGLPSLFCKSHLPD--KDITMTLEDESGRQCQLKYIAYKTG----LSAGWRQFAASHNLIEGDVLVFQLVEPTKF--KVYIIRS 143 4789******644..678************666665....9********************9876666..9998886 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MPMKELSNTQ IKNMLGQAGK SPALSNTQYE FPVDGSPSRG QAKSSAVIQA QEVRSKLEPR 60 FPSFVKSLGL PSLFCKSHLP DKDITMTLED ESGRQCQLKY IAYKTGLSAG WRQFAASHNL 120 IEGDVLVFQL VEPTKFKVYI IRSNDLTEVD GGLGLLNLDS HTKRKDADKD NAETGTEACN 180 DATRKRAHSP PSETQKKKKI GLQPVEQSED DSDEVDSEVL EESKSPDTAL QFEDIQSFEN 240 FSILVNGLLV DSELPEDVRR KYYKLCCSQN AFLHENVVEG MNHKLVVGAI SETVNIADAI 300 KACKLTTTRD DFVSWDKYLK AFELLGMNVG FLRDRLCRLA NLSNDSGAAV EARMYKEAKI 360 ERSQAGIGIR NIEVKLEELR DVCDEFGAAI ESLRSKAEVY TLKFHEEVTA PW

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MPMKELSNTQ IKNMLGQAGK SPALSNTQYE FPVDGSPSRG QAKSSAVIQA QEVRSKLEPR  60
FPSFVKSLGL PSLFCKSHLP DKDITMTLED ESGRQCQLKY IAYKTGLSAG WRQFAASHNL  120
IEGDVLVFQL VEPTKFKVYI IRSNDLTEVD GGLGLLNLDS HTKRKDADKD NAETGTEACN  180
DATRKRAHSP PSETQKKKKI GLQPVEQSED DSDEVDSEVL EESKSPDTAL QFEDIQSFEN  240
FSILVNGLLV DSELPEDVRR KYYKLCCSQN AFLHENVVEG MNHKLVVGAI SETVNIADAI  300
KACKLTTTRD DFVSWDKYLK AFELLGMNVG FLRDRLCRLA NLSNDSGAAV EARMYKEAKI  360
ERSQAGIGIR NIEVKLEELR DVCDEFGAAI ESLRSKAEVY TLKFHEEVTA PW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	199	RKRAHSPPSETQKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	4e-30	B3 family protein