PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g863770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 159aa    MW: 17897 Da    PI: 11.4255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g863770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46.1e-0971111954
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Pd.00g863770.m01  71 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 111
                       699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MGNQIQEPLT PRLIKTSPPP TSYEKRNSMA AMREMIFRIA AMQPIQIDPE SVKPPKRRNV  60
KISKDPQSVA ARHRRERISE KIRILQRLVP GGTKMDTASM LDEAIHYVKF LKKQVQTLER  120
AGADRPIGVG FQGAGQLGNV NYSALLRPSH LVGSMQMLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.12e-49bHLH family protein