PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g863900.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 165aa    MW: 17913.1 Da    PI: 5.3358
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g863900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.15.7e-1773119455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Pd.00g863900.m01  73 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 119
                       6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MFLGDGITAV DSSAALLPAG NPNVSSSSFG ASENETDEYD CESEEGLEAL VEEAAGKPGC  60
GRSSSKRSRA AEVHNMSEKR RRSRINEKMK ALQNLIPNSN KTDKASMLDE AIEYLKQLQL  120
QVQHVNALGS NIRAKRDIVA KFLAAPPFKK FLDAVSHDSL CSDEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.11e-31bHLH family protein