PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g866770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MIKC_MADS
Protein Properties Length: 206aa    MW: 24185.7 Da    PI: 9.1336
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g866770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.41.3e-30959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krienk+nrqvtfskRr+g+lKKA+E+SvLCda+va+++fs++gkl+ey++
  Pd.00g866770.m01  9 KRIENKINRQVTFSKRRTGLLKKAHEISVLCDAQVALVVFSNKGKLFEYAT 59
                      79***********************************************86 PP
2K-box101.89.5e-348817414100
             K-box  14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                         s++ e+++Lk+++e Lqr+qRh+lGedL+sL+lke+q+Le+qLe++lk+iR +Kn+l++e+i++lq+ke+++qe+n+ L kk++e
  Pd.00g866770.m01  88 PCSWNFEYSRLKAKVELLQRNQRHYLGEDLDSLTLKEIQSLEHQLETALKQIRLRKNQLMHESISDLQRKERAMQEQNNLLAKKIKE 174
                       568999******************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRTGLLK KAHEISVLCD AQVALVVFSN KGKLFEYATD  60
SCMDQILDRY ERYSYAEKQL VEPDFESPCS WNFEYSRLKA KVELLQRNQR HYLGEDLDSL  120
TLKEIQSLEH QLETALKQIR LRKNQLMHES ISDLQRKERA MQEQNNLLAK KIKEKEKAAA  180
EEVHNWEQQN NGLNLLPQPL PCLNMG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.14e-93MIKC_MADS family protein