PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g870530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 162aa MW: 18439.8 Da PI: 10.1558

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g870530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105	3.9e-33	83	141	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H h+ Pd.00g870530.m01 83 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGIVVTTYEGMHSHP 141 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MGNPHGAYST TDHLQFQNNK SPPPANGFLG LMSDMEVSNN INSSQSKSIG GPEVAVRLGT 60 KKGEKKIRKP RYAFQTRSQV DILDDGYRWR KYGQKAVKNN KFPRSYYRCT HQGCNVKKQV 120 QRLTKDEGIV VTTYEGMHSH PIEKSTDNFE HILSQMQIYT SI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	2e-59	WRKY family protein