PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g870570.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MIKC_MADS

Protein Properties

Length: 253aa MW: 28907.1 Da PI: 8.2632

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g870570.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.9	1.8e-30	23	72	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+nrqvtf+kRrng+lKKA+ELSvLC+aeva+iifs++gklye++s Pd.00g870570.m01 23 RIENKINRQVTFAKRRNGLLKKAYELSVLCEAEVALIIFSNRGKLYEFCS 72 8***********************************************96 PP
2	K-box	97.6	1.9e-32	97	186	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ea + s+qqe+ kLk+++e Lqr+qR+llGedL++Ls keL++Le+qL+ slk+iRs++++ +l+q+ +lq+ke++l+e+nk+L+++l Pd.00g870570.m01 97 AREALELSSQQEYLKLKARYEALQRNQRNLLGEDLGPLSSKELESLERQLDMSLKQIRSTRTQCMLDQLTDLQRKEHMLNEANKTLKQRL 186 556666789******************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MFNLRQLSFV SSIVLVLVCC GIRIENKINR QVTFAKRRNG LLKKAYELSV LCEAEVALII 60 FSNRGKLYEF CSSSSMLKTL ERYQKCNYGA PETNVSAREA LELSSQQEYL KLKARYEALQ 120 RNQRNLLGED LGPLSSKELE SLERQLDMSL KQIRSTRTQC MLDQLTDLQR KEHMLNEANK 180 TLKQRLFEGY HVNSLQMNPN ADEYGRQQAQ AHGDGFFHPL DCEPTLQIGY QNDPISVVTA 240 GPSVSNYMAG WLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24260.1	1e-121	MIKC_MADS family protein