PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g876120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 323aa    MW: 36973.5 Da    PI: 5.8156
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g876120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.92.6e-26143233190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY +Y+++ GF+vr++++++s+ n++++ ++fvCskeg+r+++  +++++    + ++tr gC+a++++ +++  kw+vtk+++eHnH+l+
  Pd.00g876120.m01 143 EFYVAYGRRSGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDR-VlpPPPVTREGCQAMIRLALRDGLKWVVTKFVKEHNHKLM 233
                       6******************************************99883332.245899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MGKREKQGQN NVRINPPTET VADFASASES STTCISQSLY PFILSTSPID LRLPLSSNLG  60
VGVWNIMDHQ SVHGFDSDES DLDMHAETYE NNEGMEDVLS ENLDLCLDEK EGIAEPSADL  120
PMNIEALEPN IGMEFNSRDE AREFYVAYGR RSGFTVRIHH NRRSRVNNQV IGQDFVCSKE  180
GFRAKKYVHR KDRVLPPPPV TREGCQAMIR LALRDGLKWV VTKFVKEHNH KLMSPSKVPW  240
RGSGKHLASE DEKDKRIREL SLELYNERQK CKRRCAAYEE QLNLILKDLE KHTEHMSKKV  300
ADIVQSIREI EEEQSEDSDS GWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.15e-39FAR1 family protein