PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g876140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 218aa    MW: 25315.5 Da    PI: 6.1798
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g876140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1835e-2667157190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY eYAk++GF++r+++ ++s +n  i+ r+fvCs+eg+r+ +++  +++   +r+ tr gCka++++  +++g+w vtk+  eHnH+l+
  Pd.00g876140.m01  67 DFYYEYAKHTGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHTLrKDRVLPPRPITREGCKAMIRLAARDEGRWIVTKFIREHNHKLM 157
                       6*****************************************9998822333349**********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MEGGDGGRQF LDSDGGSGDE TFESFHEHNY SVEDDMPLQH CNFVNDGLIS MEPSTGMSFQ  60
SLDDARDFYY EYAKHTGFTI RTNRIRHSLK NMAIIGRDFV CSREGFRAAK HTLRKDRVLP  120
PRPITREGCK AMIRLAARDE GRWIVTKFIR EHNHKLMAHC KFPGELPIIN ILSEVEKDKK  180
IQDLYDELQR ERERSAAFQQ QLCMILKDLE EHAEYISE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-38FAR1 family protein