PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g876510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 301aa    MW: 34233 Da    PI: 9.0242
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g876510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR190.91.7e-28137224291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  Pd.00g876510.m01 137 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP 224
                       ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MMSLVGLAEA SVRVERKLVL GLENLTWKRQ KMWQERRENA MLMWPSRIFM EFSVDGDVSG  60
EVVGSSAELE ISRAGDENET GGSSIEGAYQ LGQDDKMNQD SPGKGIIPQA VPVVSVVPAD  120
EPYVGQEFET EAAAHAFYNA YATRVGFIIR VSKLSRSRRD GSAIGRALVC NKEGYRMPDK  180
REKIVRQRAE TRVGCRAMIL VRKVSSGKWV VTKFVKEHTH PLTPGKGRRD CIYDQYPNEH  240
DKIRELSQQL AIEKKRAATY KRHLDLIFEH IEEHNESLSK KIQHIVESVK EIEGKEQQQH  300
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-100FAR1 family protein