PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g876770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 155aa    MW: 17151.4 Da    PI: 8.2076
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g876770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS543.2e-1764137376
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsse 76 
                       +lL+ecA+avs++d +++++lL+ l+elasp+gd  q+la+yf++AL  + ++s+ ++yk+l++ ++++++ ++
  Pd.00g876770.m01  64 RLLMECARAVSEKDSSKINHLLWMLNELASPYGDCEQKLASYFLQALFCKATDSGLRCYKTLTSVAEKSHSFDS 137
                       79************************************************************988887544322 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MDISLFSTNK EANFLQQYSN QIKINGLAAI DMQSTNQPQN SHTSTSRSSG SSEPCPAGAK  60
WASRLLMECA RAVSEKDSSK INHLLWMLNE LASPYGDCEQ KLASYFLQAL FCKATDSGLR  120
CYKTLTSVAE KSHSFDSARK LILKFQESEG NLKIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.16e-34GRAS family protein