PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g879700.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 173aa    MW: 19105.3 Da    PI: 5.2996
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g879700.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-191565155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      s y+GVr +k +g+Wv+eIr+p   g ++r++lg+f t+e+Aa+a++ a++ ++g
  Pd.00g879700.m01 15 SSYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVAALHFRG 65
                      67*****999.**********8...325***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MGEPNSSNAY GAATSSYRGV RKRKWGKWVS EIREPGTKTR IWLGSFETPE MAAAAYDVAA  60
LHFRGREARL NFPELVNSLP RPASSNAEDI RMAAHEAALR LRSSPAAEAH EAGSSSSNVG  120
PVTVRLSPSQ IQAINESPLD SPKMWMQMSE SMMFSGGFED QWEDMQNDSL WDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.17e-67ERF family protein