PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g881620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 271aa    MW: 30676.7 Da    PI: 6.9298
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g881620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.61.9e-152976148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g W++eEde+l ++    G g+W+ Iar  g+ R++k+c++rw +yl
  Pd.00g881620.m01 29 KGLWSPEEDEKLMRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 76
                      678*******************************************97 PP
2Myb_DNA-binding51.13.1e-1682125146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+++++E+el+v+ +  lG++ W+ Ia++++ gRt++++k++w++
  Pd.00g881620.m01  82 RGAFSPQEEELIVHFHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 125
                       89********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MRKPESMGKE EGANNINKKK KMIMSKLRKG LWSPEEDEKL MRYMLTNGQG CWSDIARNAG  60
LQRCGKSCRL RWINYLRPDL KRGAFSPQEE ELIVHFHSIL GNRWSQIAAR LPGRTDNEIK  120
NFWNSALKKS NTLFDPFSML DHRYDMAHAD ATLNVNPTCL ANLPNIGDQG YYGDCGNLGA  180
GHKMGLEGDL CVPALESRSV ESNMNGQVAE NISKTINNHF HNNCFNNTTE MIGFKVDEDM  240
LGFGNNGHGE NLRMGEWDFE GFMQDISSFL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.12e-68MYB family protein