PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g882110.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 214aa    MW: 24554 Da    PI: 9.2592
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g882110.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1903.3e-2845132290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fYn+Y+ +vGF +r+++  +sk +g+i+ rtfvC+keg+r++++++ +++ ++ra tr+gCka+l +kk + gkw+vt++ +eH+H+l+
  Pd.00g882110.m01  45 FYNAYGMRVGFMTRMNYLARSKYDGTIIGRTFVCNKEGYRKPDRRD-KTTIKPRAPTRVGCKAMLSIKKISIGKWVVTRFMKEHTHALT 132
                       *******************************************999.999************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MSHLGQGQDD EVTQNPCKDG SSVVVEADEP YVGQEFDTEE TAQAFYNAYG MRVGFMTRMN  60
YLARSKYDGT IIGRTFVCNK EGYRKPDRRD KTTIKPRAPT RVGCKAMLSI KKISIGKWVV  120
TRFMKEHTHA LTATANKGQK GLIADQVPDD KTKIEELTRE LFLERKRSAS LREIVDLLFD  180
HIEEHTQDLS KKVQYVVDKV KEIESEGKKR YNLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.24e-67FAR1 family protein