PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g882120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 257aa    MW: 29005.7 Da    PI: 9.0728
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g882120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.81.6e-2792180291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       fYn+YA ++GF++r++  ++s+ +g+i+ rt+vC+keg+r  +k++ + + r+r+ tr+gCka++ vkk + gkw+v+k+++eH+H+l+p
  Pd.00g882120.m01  92 FYNAYALRIGFRTRVNDLSRSRVDGSIIARTLVCNKEGYRVADKRE-RMSVRPRPPTRVGCKAMISVKKLSIGKWVVAKFVKEHTHTLSP 180
                       ******************************************9999.999*************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MYTTGRLYHR SIMDSVFDTE AQNGVLDNSA DVELRLNHDG AILATCVVEE ASSLGQIEQV  60
GQNSSRVEQN AVEGDEPYLG QEFDSEAAAH AFYNAYALRI GFRTRVNDLS RSRVDGSIIA  120
RTLVCNKEGY RVADKRERMS VRPRPPTRVG CKAMISVKKL SIGKWVVAKF VKEHTHTLSP  180
GKGKKGSNDQ STTDEQMKIK ELTQQLLVER KRSASYRKII DLLFNHIEEH TQNLSQKIQR  240
ITDNLQEIVS SDRRNVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-60FAR1 family protein