PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g885440.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 251aa    MW: 28196.8 Da    PI: 7.5385
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g885440.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.25.9e-1381127354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h+e+E+rRR+riNs +++Lr llP +      K +Ka+ L k+v+ +k+L
  Pd.00g885440.m01  81 KNHKEAEKRRRERINSHLDKLRGLLPCN-----SKTDKASLLAKVVQRVKEL 127
                       58*************************8.....7************999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MQPADHQNQE LYRFLAQNGL INVNSNNGSY VGFPGGASCD QFSAMQSFCS SSSYNYYPLE  60
VSGVSTEHET SPQDRALAAL KNHKEAEKRR RERINSHLDK LRGLLPCNSK TDKASLLAKV  120
VQRVKELKQQ TSELTELESF PSETDEITVL SSDDYSSDGR IIFKASLCCE DRTDLLPDLI  180
EILKSLHLKT LRAEMATLGG RIRNVLVVAA DKDHTIESVH FLQNALKSLL ERSNASERSK  240
RRRVLDRTLV L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1240244KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.11e-87bHLH family protein