PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g885910.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 370aa MW: 41315.9 Da PI: 6.7115

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g885910.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	106.6	1.2e-33	105	206	1	100
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k ltpsdv+k++rlv+pk++ae++ gg+ ++ l++edesg+sW+++++y+++s++yvltkGW+++vk+++L++gD+v+F++ ++++ Pd.00g885910.m01 105 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgGGD--SGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVLFERRRSHT 195 99*************************7666..6679********************************************887799 PP E..EEEEE-SS CS B3 90 felvvkvfrks 100 +l+++++r+s Pd.00g885910.m01 196 DRLFIGWRRRS 206 99****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MSINHFSSDH PETQWWPNTA HQQQQDPSRP HFLPQFCQDT HHHNYQAWLN SQEQPTPMSP 60 TPPTLNFNLN QNDAESDHAN QLQHQLLLQS SPPLDDHDEE NEPMFEKPLT PSDVGKLNRL 120 VIPKQHAEKY FPLGGGDSGL LLSFEDESGK SWRFRYSYWN SSQSYVLTKG WSRYVKEKRL 180 DAGDVVLFER RRSHTDRLFI GWRRRSAAAT PSAHDSGPGA TQVSGGAGES SGSGSAGGWT 240 RMFYSAPQHN NNDGGSSYPA HQYRNHSVAP YPPDCLHAAG SGVQSMSQTT SSVGSSKILR 300 LFGVNLECQQ QADHESEPST PDGSSSLSMS SSQGPTPHHH LYPRAAYDYG ADQRDFSFSR 360 DGNPMRNRRG

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MSINHFSSDH PETQWWPNTA HQQQQDPSRP HFLPQFCQDT HHHNYQAWLN SQEQPTPMSP  60
TPPTLNFNLN QNDAESDHAN QLQHQLLLQS SPPLDDHDEE NEPMFEKPLT PSDVGKLNRL  120
VIPKQHAEKY FPLGGGDSGL LLSFEDESGK SWRFRYSYWN SSQSYVLTKG WSRYVKEKRL  180
DAGDVVLFER RRSHTDRLFI GWRRRSAAAT PSAHDSGPGA TQVSGGAGES SGSGSAGGWT  240
RMFYSAPQHN NNDGGSSYPA HQYRNHSVAP YPPDCLHAAG SGVQSMSQTT SSVGSSKILR  300
LFGVNLECQQ QADHESEPST PDGSSSLSMS SSQGPTPHHH LYPRAAYDYG ADQRDFSFSR  360
DGNPMRNRRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	2e-52	B3 family protein